pennlinc/aslprep-base:20261007

Manifest digest

sha256:4a1a94a8860398137bf52f257122b71fe857bae28ba5fe34eb5958173838e800

OS/ARCH

linux/amd64

Compressed size

2.83 GB

Last pushed

about 1 month by tsalo

Type

Image

Manifest digest

sha256:4a1a94a8860398137bf52f257122b71fe857bae28ba5fe34eb5958173838e800

Image Layers

Image Layers

1ARG RELEASE0 B

2ARG LAUNCHPAD_BUILD_ARCH0 B

3LABEL org.opencontainers.image.ref.name=ubuntu0 B

4LABEL org.opencontainers.image.version=22.040 B

5ADD file ... in / 28.17 MB

6CMD ["/bin/bash"]0 B

7ENV DEBIAN_FRONTEND=noninteractive LANG=en_US.UTF-8 LC_ALL=en_US.UTF-80 B

8COPY /opt/freesurfer /opt/freesurfer # buildkit939.59 MB

9COPY /usr/local/freesurfer/python/scripts/mri_synthseg /opt/freesurfer/bin/mri_synthseg # buildkit26.82 KB

10COPY /usr/local/freesurfer/python/scripts/mri_synthstrip /opt/freesurfer/bin/mri_synthstrip # buildkit3.26 KB

11COPY /usr/local/freesurfer/models /opt/freesurfer/models # buildkit1.71 GB

12COPY /usr/local/bin/msm /usr/local/bin/msm # buildkit8.97 MB

13RUN /bin/sh -c chmod +x29.71 KB

14RUN /bin/sh -c apt-get update116.07 MB

15RUN /bin/sh -c GNUPGHOME=/tmp gpg2.36 KB

16RUN /bin/sh -c apt-get update17.1 MB

17COPY /opt/afni/install/libf2c.so /opt/afni/install/libmri.so /usr/local/lib/ #3.61 MB

18COPY /opt/afni/install/3dAutobox /opt/afni/install/3dAutomask /opt/afni/install/3dresample /opt/afni/install/3dTshift120.83 KB

19RUN /bin/sh -c ldconfig #5.63 KB

20RUN /bin/sh -c mkdir -p15.42 MB

21RUN /bin/sh -c mkdir -p16.81 MB

22ENV OS=Linux FS_OVERRIDE=0 FIX_VERTEX_AREA= FSF_OUTPUT_FORMAT=nii.gz0 B

23

ENV SUBJECTS_DIR=/opt/freesurfer/subjects FUNCTIONALS_DIR=/opt/freesurfer/sessions MNI_DIR=/opt/freesurfer/mni LOCAL_DIR=/opt/freesurfer/local

0 B

24

ENV PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 MNI_PERL5LIB=/opt/freesurfer/mni/lib/perl5/5.8.5 PATH=/opt/freesurfer/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin

0 B

25ENV AFNI_IMSAVE_WARNINGS=NO0 B

26ENV LANG=C.UTF-8 LC_ALL=C.UTF-8 PYTHONNOUSERSITE=1 FSLOUTPUTTYPE=NIFTI_GZ0 B

27RUN /bin/sh -c ldconfig #5.63 KB

28WORKDIR /tmp32 B

29LABEL org.label-schema.name=aslprep-base org.label-schema.description=ASLPrep base image0 B

Command

 ARG RELEASE